Table 1 List of metagenomic fosmid and their enzymatic activities highlighted by functional screening. GH’s listed have been included in the chip and the bold GH’s were detected on the CAZyChip
From: CAZyChip: dynamic assessment of exploration of glycoside hydrolases in microbial ecosystems
Name | Ecosystems | Structure of the carbohydrate compounds used for screening | GHs present on the CAZyCHip |
|---|---|---|---|
Cor428 | Termite gut N. corniger | Arabinofuranosidase | GH88, GH2 |
Cor435 | Termite gut N. corniger | Arabinofuranosidase | GH51 |
Cor438 | Termite gut N. corniger | Cellobiohydrolase | GH94 |
Cor1 | Termite gut N. corniger | Arabinanase and Xylanase | GH5 (1), GH5(2), GH30, GH74(1), GH74 (2) |
Cor29 | Termite gut N. corniger | Cellulase and Mannanase | GH11 |
Cor357 | Termite gut N. corniger | Xyloglucanase and Cellulase | GH5, GH94 |
Cor2 | Termite gut N. corniger | Arabinanase | GH30, GH5 |
Cor28 | Termite gut N. corniger | Mannanase | GH31, GH74, GH43, GH95, GH42 |
Cor367 | Termite gut N. corniger | Xylosidase | GH43, CE1 (1), GH120, CE1 (2) |
Pon12_1 | Earth worm gut P. corethruru | Cellobiohydrolase | GH Hyp |
Pon12_2 | Earth worm gut P. corethruru | β-glucanase | GH37 |
MiliH4 | Termite gut P. militaris | Xylanase | GH13 |
Pon13_1 | Earth worm gut P. corethruru | Xylosidase | GH10, GH3 (1), GH115, GH67, GH3(2) |
His28 | Termite gut T.hispaniolae | Arabinofuranosidase, Cellulase, Xyloglucanase, β-glucanase | GH1, GH51(1), GH127, GH51 (2) |
His52 | Termite gut T.hispaniolae | Cellulase | GH27, GH9 |
His101 | Termite gut T.hispaniolae | Xylosidase | GH23 |
His124 | Termite gut T.hispaniolae | Xylosidase, Cellulase | GH112, GH29 |
Hum4 | Human feces | β-glucanase | GH5, GH19 |
Hum5 | Human feces | β-glucanase | GH Hyp, GH16, GH3(1), GH3(2), GH3 (3), GH97 |
Hum10 | Human feces | β-glucanase | GH3 (1), GH3 (2), GH5 (1), GH5 (2), GH8, GH94, GH97 |
Hum15 | Human feces | Xylanase | CE15-GH8, CE6-GH95, GH10, GH115, GH31, GH43(1), GH43 (2), GH43-CE1, GH97 |
Rum14O19 | Cow rumen | Mannanase | GH26, GH28, GH63, GH43, GH4 |
Rum33M21 | Cow rumen | β-glucanase | GH5, GH42 |