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Table 2 The RSCU value and used codon numbers in the glycoprotein of NPV(9236 codons)

From: Analysis of codon usage bias of envelope glycoprotein genes in nuclear polyhedrosis virus (NPV) and its relation to evolution

Amino acid Codon Number RSCU Amino acid Codon Number RSCU
Phe UUU 240 1.57 Ala GCU 72 0.68
  UUC 65 0.43   GCC 168 1.59
Leu UUA 74 0.59   GCA 28 0.27
  UUG 225 1.80   GCG 154 1.46
  CUU 84 0.67 Tyr UAU 84 0.59
  CUC 112 0.90   UAC 202 1.41
  CUA 71 0.57 His CAU 93 0.63
  CUG 183 1.47   CAC 203 1.37
Ile AUU 336 1.65 Gln CAA 141 1.11
  AUC 181 0.89   CAG 114 0.89
  AUA 95 0.47 Asn AAU 182 0.51
Val GUU 89 0.64   AAC 528 1.49
  GUC 95 0.68 Lys AAA 367 1.19
  GUA 95 0.68   AAG 248 0.81
  GUG 278 2.00 Asp GAU 149 0.46
Ser AGU 73 0.69   GAC 497 1.54
  AGC 206 1.94 Glu GAA 286 0.97
  UCU 64 0.60   GAG 306 1.03
  UCC 81 0.76 Cys UGU 77 0.56
  UCA 42 0.39   UGC 200 1.44
  UCG 172 1.62 Arg CGU 73 1.01
Pro CCU 32 0.54   CGC 196 2.72
  CCC 74 1.26   CGA 39 0.54
  CCA 22 0.37   CGG 52 0.72
  CCG 107 1.82   AGA 41 0.57
Thr ACU 103 0.68   AGG 32 0.44
  ACC 208 1.37 Gly GGU 79 0.67
  ACA 94 0.62   GGC 321 2.72
  ACG 204 1.34   GGA 44 0.37
      GGG 28 0.24
  1. Preferentially used codons are displayed in bold