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Table 3 Differential expressed known miRNAs during the sacred lotus seed germination

From: Small RNA and degradome profiling reveals miRNA regulation in the seed germination of ancient eudicot Nelumbo nucifera

Change miRNA 0 h-std 12 h-std 24 h-std 36 h-std 72 h-std Significance
Up-regulated Nnu-miR156c-5p 6.68 10.04 10.59 12.26 8.62 *
Nnu-miR157a 56.90 100.44 144.83 169.62 69.79 **
Nnu-miR159a 164.04 434.63 1008.33 1065.40 334.58 **
Nnu-miR160b 6.99 10.04 16.09 13.28 11.49 **
Nnu-miR162a-3p 78.52 132.40 218.52 125.68 167.91 **
Nnu-miR165a-5p 8.27 25.26 45.31 32.02 20.12 **
Nnu-miR165a-3p 5100.3 10745.91 18344.31 10534.78 10529.28 **
Nnu-miR166b-5p 0.64 1.52 6.78 6.47 6.57 **
Nnu-miR166c 5106.39 10766.00 18370.99 10560.33 10551.04 **
Nnu-miR166d 2117.83 5231.12 9055.48 5330.06 4818.39 **
Nnu-miR167a-3p 0 0.3 1.27 1.70 0.41 *
Nnu-miR2111b 2.86 8.83 8.89 6.47 7.39 **
Nnu-miR319b 103.63 150.05 214.29 149.52 114.13 **
Nnu-miR319d 736.57 1670.66 2534.59 1737.40 1320.68 **
Down-regulated Nnu-miR1030 4.45 3.04 1.69 1.70 1.23 *
Nnu-miR170a 33.06 15.52 29.22 29.63 12.73 **
Nnu-miR171g 33.38 16.44 30.07 29.97 12.73 **
Nnu-miR2111a-5p 137.01 98.01 99.10 122.62 55.83 **
Nnu-miR393a-5p 57.86 39.87 42.77 37.13 28.74 **
Nnu-miR393c 57.22 38.65 42.35 36.78 28.33 **
Nnu-miR394a 61.67 19.18 28.37 30.99 22.58 **
Nnu-miR394b 103.32 44.13 52.09 53.13 32.43 **
Nnu-miR396b-3p 8.27 1.83 3.39 1.70 1.23 **
Nnu-miR408a 13.35 6.09 8.05 12.26 5.34 **
Nnu-miR408c 29.56 17.04 20.75 24.18 16.01 **
Nnu-miR530a 4.45 3.04 1.69 1.70 1.23 *
  1. "std" represents normalized expression level (Normalised expression, RPM) of miRNAs
  2. "*" and "**" represnent significant differentially expression between 0 h and other hours, *p < 0.05, **p < 0.01