Fig. 3
From: AP-SKAT: highly-efficient genome-wide rare variant association test
Comparison plot with several confidential intervals using the 1000 Genomes Project data, WTCCC data, and HapMap data. The comparisons of estimated p-values for the 1000 Genomes Project data, WTCCC data, and HapMap data by the standard and the adaptive procedures with a significance interval of 0.05,2.5×10−06 and 2.5×10−11. Solid and dotted lines are the base line and the Bonferroni corrected significance level (p=0.05), respectively. Circles indicate the estimated p-values of SNP sets by the standard and the adaptive procedures, and the numbers of SNP sets is 20,568,13,397,31,002, respectively. Both the vertical and the horizontal axes in these figures are logarithmic scale