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Table 1 Description of subfamily-based ABC transporter genes identified in the P. xylostella genome

From: Characterization and expression profiling of ATP-binding cassette transporter genes in the diamondback moth, Plutella xylostella (L.)

Subfamily Gene ID Protein (aa) Scaffold Position No. exons RNA-seqa qRT-PCRb
ABCA1 Px001174 969 scaffold_1135 304…19217 19 +
ABCA2 Px004981 1266 scaffold_188 295012…323041 28 +
ABCA3 Px004982 1186 scaffold_188 301796…321736 26 +
ABCA4 Px008069 1933 scaffold_288 24893…72425 42 +
ABCA5 Px008254 1086 scaffold_295 204319…225237 19 +
ABCA6 Px008255 739 scaffold_295 226197…247340 17 +
ABCA7 Px008256 1569 scaffold_295 250906…269981 29 +
ABCA8 Px009697a 233 scaffold_346 259984…265745 6 +
ABCA9 Px009697b 1296 scaffold_346 286234…303713 24 +
ABCA10 Px009783 1852 scaffold_35 644704…664586 37 +
ABCA11 Px013614 3796 scaffold_568 132102…192807 72 + +
ABCA12 Px013659 786 scaffold_570 19302…30379 18 + +
ABCA13 Px016911 1195 scaffold_856 62…22277 35 + +
ABCA14 Px016912 2714 scaffold_856 24266…52676 49 +
ABCA15 Px017838 4008 scaffold_97 202450…263565 73 +
ABCB1 Px000163 1219 scaffold_10 1427959…1440157 22 +
ABCB2 Px002636 658 scaffold_14 2273580…2292376 18 +
ABCB3 Px002801 959 scaffold_142 423653…432357 17 +
ABCB4 Px004522 124 scaffold_175 1104754…1106729 3 +
ABCB5 Px005591 1257 scaffold_200 68221…86053 24 +
ABCB6 Px006391 862 scaffold_225 442449…454413 17 +
ABCB7 Px007221 1568 scaffold_254 255160…283670 30 +
ABCB8 Px007992 823 scaffold_284 306641…321481 18 +
ABCB9 Px008679 1218 scaffold_306 348764…361734 23 +
ABCB10 Px009649 912 scaffold_344 75019…96464 18 +
ABCB11 Px012211 1279 scaffold_479 179910…193122 23 +
ABCB12 Px013177 329 scaffold_53 1202314…1212357 7 +
ABCB13 Px013728 1308 scaffold_58 462696…478688 26 +
ABCB14 Px013729 1699 scaffold_58 487550…504266 31 +
ABCC1 Px001274 548 scaffold_1153 4862…13438 12 +
ABCC2 Px002416 1327 scaffold_49 2357…26234 2 + +
ABCC3 Px002415 1406 scaffold_137 488447..513162 26 +
ABCC4 Px002418 912 scaffold_137 552867…576380 16 + +
ABCC5 Px002419 471 scaffold_137 576715…581467 9 + +
ABCC6 Px002696 1881 scaffold_140 577784…598125 27 +
ABCC7 Px002784 1069 scaffold_142 99127…105692 15 +
ABCC8 Px004042 1098 scaffold_164 402013…423822 22 +
ABCC9 Px005403 1274 scaffold_199 854564…879035 24 +
ABCC10 Px005931 143 scaffold_21 2289257…2290685 3 +
ABCC11 Px005932 451 scaffold_21 2289194…2309332 14 +
ABCC12 Px006710 1397 scaffold_236 4405…26723 24 +
ABCC13 Px008999 1818 scaffold_316 108977…138269 29 + +
ABCC14 Px009134a 662 scaffold_321 178075…188823 14 +
ABCC15 Px009134b 861 scaffold_321 194897…231476 27 +
ABCC16 Px009834 1333 scaffold_352 169022…191602 24 + +
ABCC17 Px009835 1262 scaffold_352 192939…220411 24 + +
ABCC18 Px012780 891 scaffold_51 11388…27660 15 +
ABCC19 Px014427 806 scaffold_627 73391…97213 19 +
ABCC20 Px015447 710 scaffold_712 47919…65879 12 +
ABCC21 Px015888 211 scaffold_749 69505…71718 3 +
ABCD1 Px007715 700 scaffold_274 451324…468854 18 + +
ABCD2 Px010231 765 scaffold_372 135778…153573 16 + +
ABCD3 Px010704 619 scaffold_395 100478…120592 9 +
ABCE1 Px007660 267 scaffold_271 5031…10235 11 +
ABCF1 Px001241 901 scaffold_115 254134…267193 18 +
ABCF2 Px002158 621 scaffold_132 19709…32348 11 + +
ABCF3 Px006766 657 scaffold_239 104170…121670 14 + +
ABCG1 Px000087 575 scaffold_1 1687310…1700888 8 +
ABCG2 Px001524 646 scaffold_120 391766…407227 11 +
ABCG3 Px002116 141 scaffold_131 33576…47509 2 +
ABCG4 Px002117 490 scaffold_131 50160…54319 9 +
ABCG5 Px004725 583 scaffold_180 233059…240664 11 + +
ABCG6 Px005467 518 scaffold_2 1210934…1215177 9 +
ABCG7 Px007185 587 scaffold_252 315812…338592 12 +
ABCG8 Px007949 1239 scaffold_282 234990…275031 22 +
ABCG9 Px007950 614 scaffold_282 282382…298666 12 +
ABCG10 Px008370 787 scaffold_3 1084031…1102351 15 +
ABCG11 Px008371 689 scaffold_3 1107251…1133659 14 + +
ABCG12 Px012058 763 scaffold_47 714983…763358 12 +
ABCG13 Px016406 691 scaffold_8 151167…158192 12 +
ABCG14 Px016407 653 scaffold_8 190187…201753 13 +
ABCG15 Px016675 639 scaffold_82 554151…570599 10 +
ABCG16 Px016677 641 scaffold_82 593974…605475 10 + +
ABCG17 Px016679 603 scaffold_82 593448…622103 14 +
ABCG18 Px017344 499 scaffold_909 2090…8847 10 +
ABCG19 Px017858 736 scaffold_97 716767…726144 7 +
ABCH1 Px003594 778 scaffold_158 256543…275266 16 +
ABCH2 Px004510 693 scaffold_175 841069…867340 12 +
ABCH3 Px005110 821 scaffold_19 1346939…1358906 13 +
ABCH4 Px005111 813 scaffold_19 1363123…1425269 15 +
ABCH5 Px014955 781 scaffold_677 19741…43381 14 + +
ABCH6 Px014956 899 scaffold_677 45879…80000 17 +
  1. a “+” represents the gene could be found in the P. xylostella transcriptome
  2. b “+” represents the gene was validated by qRT-PCR, and “-” represents the gene was not validated