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Table 1 Description of subfamily-based ABC transporter genes identified in the P. xylostella genome

From: Characterization and expression profiling of ATP-binding cassette transporter genes in the diamondback moth, Plutella xylostella (L.)

Subfamily

Gene ID

Protein (aa)

Scaffold

Position

No. exons

RNA-seqa

qRT-PCRb

ABCA1

Px001174

969

scaffold_1135

304…19217

19

+

ABCA2

Px004981

1266

scaffold_188

295012…323041

28

+

ABCA3

Px004982

1186

scaffold_188

301796…321736

26

+

ABCA4

Px008069

1933

scaffold_288

24893…72425

42

+

ABCA5

Px008254

1086

scaffold_295

204319…225237

19

+

ABCA6

Px008255

739

scaffold_295

226197…247340

17

+

ABCA7

Px008256

1569

scaffold_295

250906…269981

29

+

ABCA8

Px009697a

233

scaffold_346

259984…265745

6

+

ABCA9

Px009697b

1296

scaffold_346

286234…303713

24

+

ABCA10

Px009783

1852

scaffold_35

644704…664586

37

+

ABCA11

Px013614

3796

scaffold_568

132102…192807

72

+

+

ABCA12

Px013659

786

scaffold_570

19302…30379

18

+

+

ABCA13

Px016911

1195

scaffold_856

62…22277

35

+

+

ABCA14

Px016912

2714

scaffold_856

24266…52676

49

+

ABCA15

Px017838

4008

scaffold_97

202450…263565

73

+

ABCB1

Px000163

1219

scaffold_10

1427959…1440157

22

+

ABCB2

Px002636

658

scaffold_14

2273580…2292376

18

+

ABCB3

Px002801

959

scaffold_142

423653…432357

17

+

ABCB4

Px004522

124

scaffold_175

1104754…1106729

3

+

ABCB5

Px005591

1257

scaffold_200

68221…86053

24

+

ABCB6

Px006391

862

scaffold_225

442449…454413

17

+

ABCB7

Px007221

1568

scaffold_254

255160…283670

30

+

ABCB8

Px007992

823

scaffold_284

306641…321481

18

+

ABCB9

Px008679

1218

scaffold_306

348764…361734

23

+

ABCB10

Px009649

912

scaffold_344

75019…96464

18

+

ABCB11

Px012211

1279

scaffold_479

179910…193122

23

+

ABCB12

Px013177

329

scaffold_53

1202314…1212357

7

+

ABCB13

Px013728

1308

scaffold_58

462696…478688

26

+

ABCB14

Px013729

1699

scaffold_58

487550…504266

31

+

ABCC1

Px001274

548

scaffold_1153

4862…13438

12

+

ABCC2

Px002416

1327

scaffold_49

2357…26234

2

+

+

ABCC3

Px002415

1406

scaffold_137

488447..513162

26

+

ABCC4

Px002418

912

scaffold_137

552867…576380

16

+

+

ABCC5

Px002419

471

scaffold_137

576715…581467

9

+

+

ABCC6

Px002696

1881

scaffold_140

577784…598125

27

+

ABCC7

Px002784

1069

scaffold_142

99127…105692

15

+

ABCC8

Px004042

1098

scaffold_164

402013…423822

22

+

ABCC9

Px005403

1274

scaffold_199

854564…879035

24

+

ABCC10

Px005931

143

scaffold_21

2289257…2290685

3

+

ABCC11

Px005932

451

scaffold_21

2289194…2309332

14

+

ABCC12

Px006710

1397

scaffold_236

4405…26723

24

+

ABCC13

Px008999

1818

scaffold_316

108977…138269

29

+

+

ABCC14

Px009134a

662

scaffold_321

178075…188823

14

+

ABCC15

Px009134b

861

scaffold_321

194897…231476

27

+

ABCC16

Px009834

1333

scaffold_352

169022…191602

24

+

+

ABCC17

Px009835

1262

scaffold_352

192939…220411

24

+

+

ABCC18

Px012780

891

scaffold_51

11388…27660

15

+

ABCC19

Px014427

806

scaffold_627

73391…97213

19

+

ABCC20

Px015447

710

scaffold_712

47919…65879

12

+

ABCC21

Px015888

211

scaffold_749

69505…71718

3

+

ABCD1

Px007715

700

scaffold_274

451324…468854

18

+

+

ABCD2

Px010231

765

scaffold_372

135778…153573

16

+

+

ABCD3

Px010704

619

scaffold_395

100478…120592

9

+

ABCE1

Px007660

267

scaffold_271

5031…10235

11

+

ABCF1

Px001241

901

scaffold_115

254134…267193

18

+

ABCF2

Px002158

621

scaffold_132

19709…32348

11

+

+

ABCF3

Px006766

657

scaffold_239

104170…121670

14

+

+

ABCG1

Px000087

575

scaffold_1

1687310…1700888

8

+

ABCG2

Px001524

646

scaffold_120

391766…407227

11

+

ABCG3

Px002116

141

scaffold_131

33576…47509

2

+

ABCG4

Px002117

490

scaffold_131

50160…54319

9

+

ABCG5

Px004725

583

scaffold_180

233059…240664

11

+

+

ABCG6

Px005467

518

scaffold_2

1210934…1215177

9

+

ABCG7

Px007185

587

scaffold_252

315812…338592

12

+

ABCG8

Px007949

1239

scaffold_282

234990…275031

22

+

ABCG9

Px007950

614

scaffold_282

282382…298666

12

+

ABCG10

Px008370

787

scaffold_3

1084031…1102351

15

+

ABCG11

Px008371

689

scaffold_3

1107251…1133659

14

+

+

ABCG12

Px012058

763

scaffold_47

714983…763358

12

+

ABCG13

Px016406

691

scaffold_8

151167…158192

12

+

ABCG14

Px016407

653

scaffold_8

190187…201753

13

+

ABCG15

Px016675

639

scaffold_82

554151…570599

10

+

ABCG16

Px016677

641

scaffold_82

593974…605475

10

+

+

ABCG17

Px016679

603

scaffold_82

593448…622103

14

+

ABCG18

Px017344

499

scaffold_909

2090…8847

10

+

ABCG19

Px017858

736

scaffold_97

716767…726144

7

+

ABCH1

Px003594

778

scaffold_158

256543…275266

16

+

ABCH2

Px004510

693

scaffold_175

841069…867340

12

+

ABCH3

Px005110

821

scaffold_19

1346939…1358906

13

+

ABCH4

Px005111

813

scaffold_19

1363123…1425269

15

+

ABCH5

Px014955

781

scaffold_677

19741…43381

14

+

+

ABCH6

Px014956

899

scaffold_677

45879…80000

17

+

  1. a “+” represents the gene could be found in the P. xylostella transcriptome
  2. b “+” represents the gene was validated by qRT-PCR, and “-” represents the gene was not validated