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Table 4 Quantitative trait loci (QTL) for pre-harvest sprouting resistance identified in only one of the experiments conducted in the spring 2012 (2012S) and spring 2013 (2013S) greenhouse experiments and the 2013 Manhattan field experiment (2013MH)

From: Genome-wide association analysis on pre-harvest sprouting resistance and grain color in U.S. winter wheat

Chromosome Marker name Marker type Chromosome position (cM)a Positive allele frequency p R 2 (%)b Experiment
2B.1 Excalibur_c1787_1199 90K 7.97 0.81 2.97E-04 7.4 2013S
2B.1 BS00044806_51 90K 10.24 0.72 4.98E-04 6.9 2013S
2B.1 Tdurum_contig51145_476 90K 10.24 0.76 3.65E-04 7.2 2013S
2B.1 BS00022203_51 90K - 0.17 7.08E-04 6.5 2013S
2B.1 Excalibur_c3524_318 90K - 0.81 7.05E-04 6.5 2013S
2B.1 Kukri_c16758_443 90K 10.24 0.73 1.31E-04 8.3 2013S
2B.1 wsnp_JD_c3288_4296662 9K 10.24 0.77 7.57E-04 6.4 2013S
2B.1 BS00065556_51 90K - 0.77 2.56E-04 7.6 2013S
2B.2 wsnp_Ex_c13865_21720466 9K 83.07 0.42 6.42E-04 6.6 2012S
2B.2 wsnp_RFL_Contig3273_3319580 90K 83.07 0.41 7.30E-04 6.4 2012S
2B.2 RAC875_c26697_589 90K 83.07 0.35 4.27E-04 7.0 2012S
2B.2 Tdurum_contig28795_322 90K - 0.41 7.63E-04 6.4 2012S
6B.1 RAC875_c23251_624 90K 43.28 0.89 2.59E-05 9.4 2013MH
6B.1 BS00066799_51 90K 43.28 0.92 7.13E-05 8.3 2013MH
6B.1 CAP8_c1361_367 90K 43.28 0.89 2.59E-05 9.4 2013MH
  1. aThe positions of markers on W7984 reference sequence
  2. bPhenotypic variance explained by a marker that was significantly associated with pre-harvest sprouting resistance