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Fig. 1 | BMC Genomics

Fig. 1

From: High-resolution analysis of multi-copy variant surface glycoprotein gene expression sites in African trypanosomes

Fig. 1

T. brucei transcriptomes from isogenic bloodstream and insect stage cultures. a The scatter plot shows RNA-seq data for bloodstream form and insect stage cultures. Values are calculated as RPKM (Reads Per Kilobase of transcript per Million mapped reads) and are averages for a pair of independent sub-clones. Selected developmentally regulated genes are highlighted. b Base-pair resolution plots of the active VSG-ES (top panel), GPEET2 and EP1/EP2 loci (middle panels) and the phosphoglycerate kinase locus (lower panel). Read counts are normalised using reads per million mapped (RPM) and trans-spliced reads are also indicated. Beneath each panel is a schematic map for each locus. Boxes, coding sequences; arrowsheads, Pol-I promoters

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BMC Genomics

ISSN: 1471-2164

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