Table 2 Duplication levels
From: Q-nexus: a comprehensive and efficient analysis pipeline designed for ChIP-nexus
Factor | Dataset | IM | IMIB | IMUB |
|---|---|---|---|---|
Dorsal | SRR1175698 | 54 % | 50 % | 8 % |
SRR1175699 | 67 % | 64 % | 8 % | |
Max | SRR1175700 | 73 % | 65 % | 23 % |
SRR1509031 | 95 % | 92 % | 33 % | |
Myc | SRR1175701 | 85 % | 80 % | 25 % |
SRR1509032 | 96 % | 92 % | 46 % | |
Twist | SRR1509029 | 62 % | 42 % | 35 % |
SRR1509030 | 82 % | 69 % | 45 % | |
TBP | SRR1175702 | 90 % | 87 % | 20 % |
SRR1175703 | 100 % | 99 % | 30 % |