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Fig. 3 | BMC Genomics

Fig. 3

From: De novo assembly of Sockeye salmon kidney transcriptomes reveal a limited early response to piscine reovirus with or without infectious hematopoietic necrosis virus superinfection

Fig. 3

Similarities in global expression between RNA-seq libraries. Two-dimensional variance in global unigene expression of RNA-seq Sockeye salmon head-kidney libraries (n = 36) visualized by (a) multidimensional scaling analysis following edgeR normalization, or (b) principal component analysis following DESeq2 normalization and regularized-logarithm transformation. In each instance, collection relative to dpc PRV, exposure to PRV and/or IHNV, and IHNV kidney infection status (+/−) following challenge are indicated. For detailed experimental group conditions see Table 1

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BMC Genomics

ISSN: 1471-2164

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