|
Species
|
TLR
|
MyD88
|
NF-κB
|
NLR
|
IL-1R-like
|
|---|
|
A. tenebrosa (1)
|
1
|
1
|
1
|
2
|
3
|
|
A. tenebrosa (2)
|
1
|
1
|
1
|
2
|
7
|
|
A. tenebrosa (3)
|
1
|
1
|
1
|
2
|
4
|
|
A. tenebrosa (4)
|
1
|
1
|
1
|
4
|
3
|
|
A. pallida
|
-ǂ
|
1
|
0*
|
2
|
2
|
|
A. buddemeieri
|
1
|
1
|
1
|
3
|
2
|
|
A. elegantissima
|
1
|
1
|
1
|
0†
|
3
|
|
A. veratra
|
1
|
1
|
1
|
2
|
4
|
|
C. polypus (1)
|
0
|
1
|
1
|
2
|
3
|
|
C. polypus (2)
|
1
|
1
|
1
|
4
|
5
|
|
N. annamensis
|
1
|
1
|
1
|
2
|
4
|
|
N. vectensis
|
1
|
1
|
0*
|
3
|
2
|
|
Telmatactis sp.
|
0
|
0
|
1
|
0†
|
1
|
- Counts are conservative, i.e., they refer to the number of genes with a complete ORF only, not isoforms or partial genes found in each transcriptome (see Additional file 2: Tables S6 and S7 for gene, isoform and partial gene counts). Genes were considered complete when a full open reading frame was found (start and stop codons) and contained the canonical Pfam domains (see Methods). Shown are the Toll-like receptor (TLR), Nucleotide-binding and Leucine-rich Repeat containing gene family (NLR), Myeloid Differentiation primary response gene 88 (MyD88) and Nuclear Factor kappa-light-chain-enhancer of activated B cells (NF-κB) and Interleukin-1 receptor (IL-1R-like). ǂNo TLR in Aiptasia genome [27]. *NF-κB in Nematostella does not have ankyrin repeats [71]; here NF-κB was only considered complete if it contained the RHD and ankyrin repeats (see Methods). *Aiptasia also has only a RHD-IPT (no ankyrin repeats) containing NF-κB (AIPGENE8848 sp|P19838|NFKB1). †Partial genes found, see Additional file 2: Table S7
