Table 3 Tissue specific gene signatures: list of genes appearing differentially expressed in each tissue-MSC and fibroblasts when contrasted to each other

AD-MSC

9

AC104654.2, AP000695.2, AP000843.1, MATN3, MFAP3L, PCDH9, PDLIM3, PPAPDC1A, Z69713.1

BM-MSC

37

ACAN, AGT, ANK3, AP001422.1, C20orf103, C20orf197, C5orf23, CHRDL1, CXCL16, DLX5, ENTPD1, EPHX1, EYA1, EYA2, EYA4, FBXO16, FMO3, HEY2, IGF2, IGFBP2, ITGA7, JAG1, KCNMB1, KIAA1217, KLHL3, LBP, LEPR, MAOB, NOTCH3, NPR3, RP11-145A3.3, SFTA1P, SLPI, TM4SF20, VCAM1 (CD106), ZNF423

PL-MSC

123

AC003092.2, AC012409.1, AC026250.2, AC069155.1, AC090625.2, ADAM23, ADRA1D, AL121578.3, ALDH1A1, ALDH1A2, AMIGO2, ANO4, AR, ATRNL1, BRIP1, C10orf57, C12orf59, C16orf52, C3orf72, C9orf167, CACNA1H, CADPS2, CAMK1G, CAPN6, CARD16, CKS2, CNTN4, CTSH, CYTSB, DGKH, DNAM1 (CD226), DTNA, E2F7, ETV4, F2RL1, FABP4, FAM105A, FAM155A, FAM60A, FJX1, GAS2L3, GBP4, GCLC, GLRXP3, GPR126, GPR37, HMGA2, HOXD10, HSD17B2, HTR1D, HTR2B, IFIT2, IFIT3, INA, KCNA3, KRT19, LAMA1, LCP1, LIMS1, LPCAT2, LRRC1, MAP3K5, MAPK8, MCTP1, MSI2, MUM1L1, NCAM1 (CD56), NEFM, NETO2, NID1, NNAT, NR2F1, PAMR1, PCDH10, PDCD1LG2, PDGFC, PLAT, PLBD1, PLCXD3, PMAIP1, RARB, RASGRP1, REN, RP11-117P22.1, RP11-251 J8.1, RP11-332P22.1, RP11-548O1.1, RP11-87H9.2, RP4-706A16.2, RPS6KA6, S1PR3, SCN9A, SERPINB2, SGIP1, SLC16A4, SLC1A2, SLC4A8, SLITRK4, SNCA, SNCAIP, SNORD27, SOCS1, SORBS1, SOX5, SSTR1, ST6GALNAC5, STRA6, SYPL2, SYT14, SYT16, SYTL5, TFPI2, TMEM154, TMEM51, TNFSF15, TNFSF18, TNFSF4, TRHDE, TRPC4, ZNF516, ZNF804A

FIB

60

AC008440.2, AC112217.2, ADAM33, ADH1B, AIM1, AK5, APCDD1, APOD, AQP9, BMPER, C9orf21, CCBE1, CCDC102B, CCRL1, CDON, CH25H, CLIC2, COLEC12, CYP7B1, DKK2, DNM1, GLDN, GLI3, GRPR, GTSF1, IGSF10, KIAA0802, KIT, LRRC15, MASP1, MBNL3, MMP27, OMD, OR1H1P, OR1Q1, OSR2, PAX3, PDGFRL, PHACTR3, PLEKHG1, PLXNC1, PRLR, RCAN2, ROBO2, RP11-392O17.1, RXFP1, SECTM1, SEMA3D, SIPA1L2, SLC9A9, STK32B, SVIL, TDO2, TFAP2C, TGFBR3, THBS4, THRB, TWIST1, TWIST2