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Table 8 Cold-affected miRNAs and corresponding circadian clock genes

From: MicroRNAs regulate gene plasticity during cold shock in zebrafish larvae

MicroRNA

Up/Down

Target

Dre-mir-29b

Up

Per2, Per3, Cry3, Ck1,Clock3

Dre-mir-135

Up

Per1a, Nr1d4a

Dre-mir-99

Up

Arntl1b

Dre-mir-92a

Up

Bhlhe41

Dre-mir-96

Up

Clock3

Dre-mir-204

Up

Nr1d1

Dre-mir-128

Up

Bhlhe40

Dre-mir-107

Up

Bhlhe41

Dre-mir-2192

Down

Clock

Dre-mir-18

Down

Per2, Per3,Bhlhe41

Dre-mir-202

Down

Nr1d2b

Dre-mir-181

Down

Bhlhe40, Nr1d12a

Dre-mir-363

Down

Nr1d2a, Bhlhe41

Dre-mir-130

Down

Ck1ε, Nr1d12a

Dre-mir-301

Down

Ck1ε

Dre-mir-184

Down

Cry1b

Dre-mir-499

Down

Clock3, Nr1d14b

  1. Up/Down: Significantly up-regulated or down-regulated miRNAs are listed, the comprehensive Targeting clock genes are listed at the right column