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Table 3 SNP summary of 11 parents and 547 RILs

From: A MAGIC population-based genome-wide association study reveals functional association of GhRBB1_A07 gene with superior fiber quality in cotton

Samplea

Genotype (%)

Reads (million)

bp (million)

Homozygote (major allele)

Homozygote (minor allele)

Heterozygote

Missing

AU

59.2

16.1

18.8

5.9

2.55

163.07

C315

61.4

12.8

20.5

5.3

2.21

141.30

DP90

63.4

11.7

20.9

4.0

2.48

158.58

FM966

60.6

16.9

17.7

4.8

2.63

168.27

HS26

60.5

17.3

18.2

4.1

2.64

169.22

M240

61.0

16.9

17.8

4.4

2.73

174.61

PSC355

62.6

13.2

19.4

4.8

2.40

153.40

PSC355

62.6

13.2

19.4

4.8

2.40

153.40

SG747

65.5

12.1

17.9

4.5

2.35

150.30

ST474

66.4

10.6

19.6

3.3

2.17

138.96

ST825

63.8

14.0

17.1

5.1

2.20

141.11

TP

58.9

17.9

17.8

5.4

2.51

160.70

RIL avg.

62.1

14.8

16.1

6.9

2.12

135.93

  1. a AU Acala Ultima, C315 Coker 315, DP90 Deltapine Acala 90, FM966 Fibermax 966, HS26 Paymaster HS-26, M240 M-240RNR, PSC355 Phytogen 355, SG747 Suregrow 747, ST474 Stoneville 474, ST825 Stoneville 825, TP Tamcot Pyramid