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Table 4 Marker-trait associations and QTL identified at different significance level

From: A MAGIC population-based genome-wide association study reveals functional association of GhRBB1_A07 gene with superior fiber quality in cotton

Trait Marker trait association QTLb
p ≤ 0.01 p ≤ 0.001 p ≤ 0.0001 Total p ≤ 0.01 p ≤ 0.001 p ≤ 0.0001 Total # Chr.
ELO 54 8 7 69 13 1 1 15 10
MIC 58 6 2 66 16 0 0 16 14
SFC 54 9 2 65 10 0 1 11 10
STR 55 7 9 71 11 1 1 13 12
UHM 62 9 2 73 15 2 0 17 12
UI 58 8 6 72 13 0 1 14 13
Total 294a 41a 22a 357a 78 4 4 86 24a
  1. aSome marker loci were associated with more than one trait
  2. bMarker loci mapped within 5 Mb intervals were considered as a unique QTL