A MAGIC population-based genome-wide association study reveals functional association of GhRBB1_A07 gene with superior fiber quality in cotton

Table 5 The extremely significant (p ≤ 0.0001) associations between markers and phenotypes

Trait	Marker	Chr.	Position (bp)	p value	MAF	R²	Allelic effect
ELO	MGHES-021	A05	12471766	7.48E-14	0.49	0.32	0.306
	MUSS275	A06	47495244	3.28E-07	0.50	0.28	0.196
	DPL0644c	A12	66210831	7.02E-11	0.40	0.30	−0.279
	CFB9477	D04	47719839	1.38E-12	0.30	0.31	−0.313
	CFB9479	D04	47872771	1.58E-11	0.32	0.31	−0.305
	SHIN-0966	D11	61712633	2.30E-09	0.49	0.29	0.223
	MUSB0846	D12	20174365	5.74E-12	0.49	0.31	0.274
MIC	CFB7672	A09	73256219	5.53E-05	0.21	0.11	−0.089
MIC	CFB8181	A12	9895997	7.48E-05	0.50	0.11	−0.138
SFC	CFB7265	A07	70370764	6.22E-05	0.12	0.07	−0.266
SFC	C2-0114	A07	72331925	2.32E-06	0.14	0.08	−0.240
STR	CFB7265	A07	70370764	2.41E-07	0.12	0.15	0.897
	DPL0852	A07	71015749	8.34E-08	0.18	0.15	0.689
	CFB7266	A07	71506333	4.17E-08	0.23	0.16	−0.701
	CFB7267	A07	71510617	1.90E-05	0.18	0.14	0.572
	CFB7268	A07	71510635	2.77E-05	0.19	0.14	−0.559
	DPL0757	A07	71588662	1.73E-07	0.17	0.15	0.698
	CFB7269	A07	72135309	1.45E-06	0.19	0.14	−0.619
	C2-0114	A07	72331925	1.07E-10	0.14	0.18	0.868
	CFB7271	A07	72856692	1.98E-05	0.13	0.14	0.625
UHM	CFB9550	D05	5051755	1.57E-05	0.49	0.14	0.011
UHM	CFB11211	D11	24009159	1.07E-06	0.10	0.15	0.018
UI	MUSS122	A06	93195954	6.92E-05	0.25	0.07	0.207
	SHIN-1138	A07	68260333	4.85E-05	0.19	0.07	−0.010
	CFB7265	A07	70370764	2.31E-05	0.12	0.08	0.384
	DPL0852	A07	71015749	4.66E-06	0.18	0.08	0.309
	DPL0757	A07	71588662	1.36E-05	0.17	0.08	0.304
	C2-0114	A07	72331925	2.01E-08	0.14	0.10	0.404

ISSN: 1471-2164