Table 14 The numbers of estimated repeat numbers matched and mismatched with parents in terms of Mendelian inheritance
From: STR-realigner: a realignment method for short tandem repeat regions
Period | STR-realigner | ReviSTER | IndelRealigner | --realign option | Original BAM | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| Â | #CR | #IR | #CR | #IR | #CR | #IR | #CR | #IR | #CR | #IR |
1 | 1772 | 777 | 1773 | 770 | 1770 | 773 | 1621 | 897 | 1775 | 776 |
| Â | (1834) | (860) | Â | Â | Â | Â | Â | Â | Â | Â |
2 | 345 | 81 | 328 | 94 | 323 | 90 | 317 | 97 | 328 | 84 |
3 | 70 | 6 | 69 | 4 | 66 | 7 | 65 | 8 | 65 | 7 |
4 | 222 | 24 | 224 | 20 | 219 | 23 | 214 | 28 | 216 | 26 |
5 | 75 | 27 | 75 | 29 | 75 | 28 | 73 | 31 | 73 | 28 |
6 | 73 | 28 | 67 | 28 | 67 | 27 | 68 | 22 | 70 | 26 |
Total | 2557 | 943 | 2536 | 945 | 2520 | 948 | 2358 | 1083 | 2527 | 947 |