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Table 1 SNP count per chromosome

From: Genome-wide SNP discovery and population structure analysis in pepper (Capsicum annuum) using genotyping by sequencing

Chromosome # SNPs # SNPs within annotated exons % SNPs within annotated exons # of affected genes
 1 12044 3807 31.6 816
 2 11426 4466 39.1 949
 3 13948 4942 35.4 1026
 4 8419 2607 31.0 555
 5 7886 2554 32.4 482
 6 10854 3254 30.0 700
 7 7754 2525 32.6 534
 8 6890 2218 32.2 492
 9 6428 1890 29.4 409
 10 7574 2331 30.8 520
 11 7058 2003 28.4 445
 12 8310 2582 31.1 549
 TOT 108591 35179 32.4 7477
  1. For each chromosome it is reported the total number of polymorphisms, the number of SNPs within annotated exons and the number of affected genes