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Fig. 1 | BMC Genomics

Fig. 1

From: TRPM2 SNP genotype previously associated with susceptibility to Rhodococcus equi pneumonia in Quarter Horse foals displays differential gene expression identified using RNA-Seq

Fig. 1

a Bedgraphs representing RNA-Seq coverage of TRPM2 for each genotype from top to bottom: AA, AB, and BB. b Cufflinks output of TRPM2 novel isoform overlaying the equine Ensembl predicted gene annotations. c PCR amplicons stained with EtBr reveal splicing from cuffdiff identified TRPM2-1 to TRPM2-2 as well as multiple isoforms. Primer locations indicated by colored arrows in panel b and c and resulting amplicons of primer pairs represented in in panel c

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BMC Genomics

ISSN: 1471-2164

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