TRPM2 SNP genotype previously associated with susceptibility to Rhodococcus equi pneumonia in Quarter Horse foals displays differential gene expression identified using RNA-Seq

Table 1 Pairwise comparisons of potentially novel TRPM2 transcript expression values

Cufflinks ID	Transcript ID	AA	AB/BB	Log₂ FC	P value	P adjusted
CUFF.23429	TRPM2-1	90.99	118.90	0.39	0.0971	0.1942
CUFF.23430	TRPM2-2	168.23	214.17	0.35	0.1630	0.3260
		AA	AB
CUFF.23429	TRPM2-1	91.81	130.55	0.51	0.0224	0.0448
CUFF.23430	TRPM2-2	169.73	225.94	0.41	0.0783	0.1566
		AA	BB
CUFF.23429	TRPM2-1	90.63	110.04	0.28	0.2663	0.5326
CUFF.23430	TRPM2-2	167.57	205.44	0.29	0.2766	0.5532
		AB	BB
CUFF.23429	TRPM2-1	128.83	110.27	−0.22	0.3456	0.6912
CUFF.23430	TRPM2-2	223.02	205.87	−0.12	0.6565	1.0000

ISSN: 1471-2164