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Table 1 Primers and annealing temperatures used for pyrosequencing

From: Exposure of bovine oocytes and embryos to elevated non-esterified fatty acid concentrations: integration of epigenetic and transcriptomic signatures in resultant blastocysts

 

Forward primer

Reverse primer

Sequencing primer

Annealing temperature

COL6A3

AGGGAAGGTTGTTTAGAGGA

ACCTAAAAATACTAATAACTAATCCATCA

GGTTTTATATATAAGTAAAAGAA

57 °C

APAF1

TTTGGATGTTTTGTTAGATTGTAGTT

AACTTACCACTACTACCCTCTAC

ATTGGGTTTTGTGTG

54 °C

RFC4

TATTTTAAAGGAGATTAGTTTTGGGTGTT

CTCAATTCAATCATAACTCAATCCTATA

ATTGATGTTGAGGTTGAAA

60 °C

PLSCR3

TGGTTTTGTTGTTTGGTAGTTAAT

CTCATATAACCAAACCCTTAATCTATC

AGTTTTTTTATTTTAGTAGTTGG

54 °C

ELOVL1

GTTTTGTAGAGTTGGTGAGTGTA

ATTTACTATCTAACCAAATCACTTCAC

AGTTGGTGAGTGTATG

59 °C

TBKBP1

AGAGATGAGAAGGTTAGAGATTTAAGTAT

AACCCTACCACATCTACATCCTCATA

GTTTTAAATTAGTTGGGAGATA

58 °C

ERCC1

TTTTTAGTTTGGATATATAGATATGGGA

ACTCAACCCCACTCATCT

GGATATATAGATATGGGAAATATT

52 °C

CELF2

AGGAGAGAGGTGGTAATAATAAAGTTATA

AACCAAAACCCTTTTCTCCA

GTTGGTGATGAATTTGTAG

53 °C

ZFAND6

TGGGGAGGAGTATATGTGTATT

CTTATTCTACCATTACTACTATTCTATCTT

ATATGTGTATTTTTTTTTATTATAT

55 °C

PREX1

GGTTGGGTATTTATGTTTAGAAATTAAGT

ACCTTCTCTATAATATTTATTCCTCTACC

ATTAAGTGAGAAGGTATTTG

56 °C

APPL2

GTAGGTTTTATGGGGAAATTATGTAT

TTCCATACCCTACCTATAAAAAATCTTC

GTTTTTTTTTTTTATTGGGTAGA

55 °C

GCLC

GTTAAATGGATGAGGGAGTTTAT

ATTTTACTTCCACTATACCTAACTTT

TGAATTATAGTTTTTTTTTAAAGTG

52 °C