Table 2 Classification and frequency of the most important transposable elements in the genome of P. subalpina
TE class | TE family | In % of TEs | Cumulative length in the genome [in kb] | Proportion of the genome |
|---|---|---|---|---|
Class I | Gypsy | 28.9% | 1,452 | 2.1% |
| Â | Copia | 26.1% | 1,308 | 1.9% |
| Â | non LTR | 4.6% | 229 | 0.3% |
Class II | Tc1 Mariner | 8.2% | 411 | 0.6% |
| Â | Helitron | 3.9% | 194 | 0.3% |
| Â | MITE | 1.2% | 59 | 0.1% |
| Â | hAT | 0.6% | 32 | 0.0% |
| Â | Mutator | 0.4% | 18 | 0.0% |
Not classified | not classified | 26.2% | 1,284 | 1.8% |