Skip to main content

Table 4 Genes of P. subalpina likely acquired by horizontal gene transfer from non-fungal species

From: Globally distributed root endophyte Phialocephala subalpina links pathogenic and saprophytic lifestyles

Protein

Putative function

SignalP

Remarks

Order

Closest species

Habitat

PAC_13705

fatty acid desaturase

  

n.a.

Sphaerosoma arcticus

n.a.

PAC_15031

metallo-β-lactamase

 

Bacillales

Brevibacillus laterosporus

soil/water/insects

PAC_18575

   

Acidobacteriales

Acidobacteria bacterium KBS 146

soil

PAC_13085

β-lactamase

  

Caulobacteriales

Phenylobacterium sp.

plant root associated

PAC_16385

terpenoid cyclase

  

Rhizobiales

Chelativorans sp.

soil/rhizosphere

PAC_19778

glyoxalase

 

gene fragment

Burkholderiales

Collimonas arenae

soil

PAC_12936

glycoside hydrolase

 

with P. scopiformis

Burkholderiales

Paraburkholderia sp.

plant-associated bacteria

PAC_20157

hydrolase

secreted protein

with O. maius

Sphingobacteriales

Pedobacter heparinus

soil

PAC_01946

adenine deaminase

 

with P. scopiformis

Actinomycetales

Frankia sp. EuI1c

soil/plant symbiont

PAC_03408

kynurenine formamidase

 

Actinomycetales

Frankia sp. EUN1f

soil/plant symbiont

PAC_03301

 

secreted protein

with O. maius and P. scopiformis

Actinomycetales

Streptomyces sp.

mostly soil

PAC_17397

methyltransferase

 

with O. maius

Actinomycetales

Streptomyces sp.

mostly soil

PAC_19296

   

Actinomycetales

Streptomyces sp.

mostly soil

PAC_14321

  

with O. maius

Burkholderiales

Curvibacter lanceolatus

n.a.

PAC_07909

quinoprotein amine dehydrogenase

secreted protein

with O. maius

Burkholderiales

Paraburkholderia udeis

soil/rhizosphere

PAC_06755

carotenoid oxygenase

 

with O. maius

Actinomycetales

Streptomyces sp.

mostly soil

PAC_02359

   

Actinomycetales

Mycobacterium avium

water/soil

PAC_18364

peptidase

 

with P. scopiformis

Rhizobiales

Bradyrhizobium sp.

soil/plant symbiont

PAC_05940

oleate hydratase

 

with P. scopiformis

Spirochaetales

Leptospira sp.

n.a.

PAC_15362

lipase

 

with P. scopiformis

Actinomycetales

various species

n.a.

PAC_11525

  

with P. scopiformis

Ktedonobacterales

Ktedonobacter racemifer

soil