Table 6 Species included in the comparative genomic analysis
Species | Code | Lifestyle | Class | Order | Family | Reference |
|---|---|---|---|---|---|---|
Botrytis cinerea | Bc | Pathogen (necrotroph) | Leotiomycetes | Helotiales | Sclerotiniaceae | [55] |
Sclerotinia sclerotiorum | Ssc | Pathogen (necrotroph) | Leotiomycetes | Helotiales | Sclerotiniaceae | [55] |
Blumeria graminis | Bg | Pathogen (obligate biotroph) | Leotiomycetes | Erysiphales | Erysiphaceae | [124] |
Marssonina brunnea | Mb | Pathogen (hemi-biotroph) | Leotiomycetes | Helotiales | Dermateaceae | [125] |
Fusarium oxysporum f. sp. lycopersici | Fo | Pathogen (hemi-biotroph) | Sordariomycetes | Hypocreales | Nectriaceae | [56] |
Aspergillus flavus | Af | Saprophyte (soil & rhizosphere) | Eurotiomycetes | Eurotiales | Trichocomaceae | [126] |
Trichoderma reesei | Tr | Saprophyte (soil)a | Sordariomycetes | Hypocreales | Hypocreaceae | [127] |
Chaetomium globosum | Chg | Saprophyte (soil/plant debris) | Sordariomycetes | Sordariales | Chaetomiaceae | [128] |
Penicillium chrysogenum | Pc | Saprophyte (soil) | Eurotiomycetes | Eurotiales | Aspergillaceae | [129] |
Glarea lozoyensis | Gl | Saprophyte(soil) b | Leotiomycetes | Helotiales | Helotiaceae | [130] |
Oidiodendron maius | Om | Saprophyte (peat bog)/ericoid mycorrhizal | Leotiomycetes | Leotiomycetes incertae sedis | Myxotrichaceae | [32] |
Tuber melanosporum | Tm | Ectomycorrhizae | Pezizomycetes | Pezizales | Tuberaceae | [66] |
Cenoccocum geophilum | Ceg | Ectomycorrhizae | Dothideomycetes | Pleosporomycetidae incertae sedis | Gloniaceae | [131] |
Phialocephala subalpina | Ps | Root endophyte | Leotiomycetes | Helotiales | Dermateaceae | this paper |