Fig. 3From: Bacterial whole genome-based phylogeny: construction of a new benchmarking dataset and assessment of some existing methodsPhylogenetic tree inferred by CSI phylogeny. This is the un collapsed version of the best scoring tree according to the new method for tree comparison. The phylogeny is inferred by CSI Phylogeny on all 101 sequenced strains, using the assembled contigs from the root strain as reference genome, SNP pruning disabledBack to article page