From: Spread of avian pathogenic Escherichia coli ST117 O78:H4 in Nordic broiler production
Group 1 | Group 2 | Group 3 | Group 4 | Group 5 | Group 6 | Healthy | Diseased | |
---|---|---|---|---|---|---|---|---|
Isolates | 47 | 8 | 5 | 4 | 3 | 3 | 15 | 99 |
Farms | 34 | 8 | 4 | 4 | 2 | 3 | 15 | 73 |
Serotype | O78:H4 | O53:H4 | O103:H2 | O18ac:H7 | O149:H23 | O5:H10 | - | - |
ST | 117 | 117 | 1146 | 95 | 1163 | 93 | - | - |
fimA | + | + | + | + | + | 1/3 | 12/15 | 94/99 |
fimC | + | + | + | + | + | + | 13/15 | 96/99 |
papC | 4/99 | |||||||
tsh | + | + | 20/99 | |||||
fyuA | + | 3/4 | 1/15 | 28/99 | ||||
iroD | + | + | + | + | + | 4/15 | 94/99 | |
iroN | + | + | + | + | + | 3/15 | 93/99 | |
irp2 | + | + | 1/15 | 30/99 | ||||
iucA | + | + | + | + | + | 7/15 | 84/99 | |
iucD | + | + | + | + | 1/3 | 7/15 | 84/99 | |
cva | + | + | + | + | + | 12/15 | 39/99 | |
cvi | + | + | + | + | + | 12/15 | 39/99 | |
iss | + | + | 2/5 | + | + | + | 7/15 | 97/99 |
ompA | + | + | + | + | + | + | 15/15 | 99/99 |
vat | + | + | + | 71/99 | ||||
hlyA | ||||||||
ibeA | + | 1/3 | 13/99 |