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Table 1 Genetic map of a RIL population of C. pepo

From: An SNP-based saturated genetic map and QTL analysis of fruit-related traits in Zucchini using Genotyping-by-sequencing

LG

N° markers

Length (cM)

Average spacing (cM)

Maximum spacing (cM)

N° of nucleotides (% of total genome)

N° of anchored scaffolds

C. pepo v3.2. scaffolds

1

770

303.4

0.4

16.8

21,302,769 (7.95)

16

10, 24, 32, 40, 46, 51, 59, 63, 78, 79, 84, 91, 105, 111, 144, 175

2

575

187.4

0.3

8.8

14,361,414 (5.36)

12

1, 41, 55, 62, 76, 99, 128, 140, 162, 168, 169, 208

3

527

215.4

0.4

10.0

13,761,414 (5.14)

11

6, 19, 38, 44, 117, 118, 122, 163, 187, 195, 210

4

501

148.8

0.3

4.6

10,858,678 (4.05)

8

20, 21, 22, 66, 86, 143, 159, 180

5

448

125.1

0.3

7.1

10,667,745 (3.98)

5

12, 18, 48, 71, 121

6

415

145.4

0.4

9.2

10,134,556 (3.78)

4

3, 8, 89, 101

7

412

108.2

0.3

5.8

10,056,303 (3.75)

8

35, 36, 42, 43, 82, 83, 106, 13127

8

383

158.2

0.4

7.2

9,911,322 (3.70)

6

14, 26, 61, 72, 75, 132

9

371

161.8

0.4

11.4

9,828,092 (3.67)

8

13, 54, 64, 77, 130, 146, 161, 197

10

357

134.5

0.4

15.5

9,823,969 (3.67)

3

9, 29, 68

11

335

125.0

0.4

6.9

9,820,194 (3.67)

4

15, 16, 47, 131

12

332

120.6

0.4

7.8

9,347,089 (3.49)

10

30, 31, 45, 58, 65, 74, 96, 103, 120, 186

13

326

110.8

0.3

7.7

8,951,933 (3.34)

11

17, 49, 53, 88, 94, 107, 108, 113, 124, 141, 153

14

325

97.5

0.3

6.4

8,813,444 (3.29)

2

11, 39

15

317

147.1

0.5

8.3

8,682,934 (3.24)

11

23, 56, 60, 69, 92, 93, 97, 98, 119, 135, 172

16

297

115.3

0.4

11.7

8,672,504 (3.24)

7

28, 30, 34, 80, 85, 104, 129

17

290

128.4

0.4

12.6

8,327,454 (3.11)

8

4, 67, 70, 78, 100, 152, 200, 206

18

289

97.9

0.3

9.6

8,239,682 (3.08)

2

25, 33

19

185

63.8

0.3

7.3

8,114,804 (3.03)

1

5

20

162

71.7

0.4

6.9

7,958,368 (2.97)

2

2, 27

21

101

51.4

0.5

7.0

4,746,772 (1.77)

6

7, 52, 81, 110, 115, 148

Total

7718

2817.6

0.4

16.8

212,381,440 (79.27)

145

 
  1. For each linkage group, number of markers, total genetic distance, average and maximum spacing between adjacent markers is shown. Number of scaffolds of the C. pepo genome v.3.2 included in each linkage group is also shown
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