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Table 3 Comparison of the SNP and indel rates of selected organisms

From: An improved genome assembly uncovers prolific tandem repeats in Atlantic cod

Species SNP rate Indel rate N50 contig N50 scaffold
  (SNPs/base) (indels/base) (kbp) (Mbp)
Atlantic cod (gadMor2) 4.07 × 10 −3 0.98 × 10 −3 116 1.15
Sticklebacka 1.43 × 10 −3 NA 83.2 10.8
Miiuy croakerb 2.24 × 10 −3 0.61 × 10 −3 73.3 1.15
Atlantic herringc 3.2 × 10 −3 NA 21.3 1.84
Ciona savignyi d 46 × 10 −3 NA 12 0.192
Ciona savignyi e 46 × 10 −3 NA 47 0.989
  1. aFrom [68]
  2. bFrom [67]
  3. cFrom [69]
  4. dFrom [66]
  5. eFrom [66], with haplotype assembly and merging