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Fig. 6 | BMC Genomics

Fig. 6

From: Protein complex-based analysis is resistant to the obfuscating consequences of batch effects --- a case study in clinical proteomics

Fig. 6

Complex-based methods are robust against batch effects (simulations): Distribution of F-scores for SP, HE, SNET and FSNET in simulated data where batch effects are absent or present based on the simulated complexes (pseudo-complexes) and individual proteins. Note that for SP, the F-scores shown are always based on individual proteins (Abbreviations: Single-Protein t-test, SP; Hypergeometric Enrichment, HE; SubNET, SNET; Fuzzy SNET; FSNET)

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BMC Genomics

ISSN: 1471-2164

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