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Table 1 Some examples of whole genome sequencing of aquatic and aquaculture species

From: Aquaculture genomics, genetics and breeding in the United States: current status, challenges, and priorities for future research

Species References
Ictalurus punctatus (Channel catfish) Liu et al. 2016 [5]
Ictalurus furcatus (Blue catfish) Waldbieser and Liu, unpublished data
Oncorhynchus mykiss (Rainbow trout) Berthelot et al. 2014 [7]
Salmo salar (Atlantic salmon) Lien et al. 2016 [6]
Oreochromis niloticus (Nile tilapia) Brawand et al. 2014 [8]
Crassostrea virginica (Eastern oyster) Gomez-Chiarri et al. 2015 [15] & personal communication
Crassostrea gigas (Pacific oyster) Zhang et al. 2012 [9]
Penaeus/Litopenaeus vannamei (Pacific white shrimp) Xiang, 2016, personal communication
Penaeus monodon (Giant tiger prawn) Warren, personal communication
Atlantic Cod Star et al. 2011 [142]
Bluegill sunfish Wang, personal communication
California yellowtail Severin, Purcell, Hyde, personal communication
Cavefish McGaugh et al. 2014 [143]
Coelacanth Amemiya et al. 2013 [144]
Common carp Xu et al. 2014b [145]
Indian catfish Das, personal communication
Japanse flounder Chen, Yellow Sea Fisheries Institute, China, personal communication
Grass carp Wang et al. 2015 [146]
Lamprey Smith et al. 2013 [147]
Medaka Kasahara et al. 2007 [148]
Pacific abalone Severin, Purcell, Hyde, personal communication
Pearl oyster Du, personal communication
Platyfish Schartl et al. 2013 [149]
Rohu carp Das, personal communication
Sea bass Tine et al. 2014 [150]
Scallops Bao, Ocean University of China, personal communication
Sea cucumber Xiang, Chinese Academy of Sciences, China, personal communication
Shark Venkatesh et al. 2014 [151]
Sole Chen et al. 2014 [152]
Stickleback Jones et al. 2012 [153]
Striped bass Reading, 2016, personal communication
Tetraodon Jaillon et al. 2004 [154]
Turbot Figueras et al. 2016 [155]
White bass Reading, 2016, personal communication
Yellow croaker Wu et al. 2014 [156]
Yellow perch Wang, personal communication
Zebrafish Howe et al. 2013 [157]
  1. Bold data are the species initially included in the NRSP-8 Project (Alcivar-Warren et al. 1997)