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Table 2 Summary of the sequencing data from different wild oil-tea camellia samples

From: Leaf transcriptome analysis of a subtropical evergreen broadleaf plant, wild oil-tea camellia (Camellia oleifera), revealing candidate genes for cold acclimation

Sample

No. of clean reads

Clean bases (Gb)

Error rate (%)a

Q20 (%)b

Q30 (%)c

GC content (%)

LS01

69108798

6.91

0.04

96.02

91.08

45.68

LS02

77475252

7.75

0.04

96.70

91.92

46.18

LS03

60820248

6.08

0.04

96.12

91.17

45.85

LS04

63491250

6.35

0.03

97.74

92.96

48.14

JG01

88495706

8.85

0.04

96.26

91.30

45.92

JG02

70196006

7.02

0.03

97.99

93.24

47.72

JG03

70856840

7.08

0.04

96.23

91.04

46.06

JG04

72575848

7.26

0.04

96.42

91.46

46.52

  1. aPercentage of the error bases
  2. bPercentage of the bases with Qphred > 20 (error rate < 1%)
  3. cPercentage of the bases with Qphred > 30 (error rate < 0.1%)
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BMC Genomics

ISSN: 1471-2164

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