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Table 1 Summary of de novo pea axillary bud transcriptome statistics

From: De novo transcriptome assembly reveals high transcriptional complexity in Pisum sativum axillary buds and shows rapid changes in expression of diurnally regulated genes

Statistic

Pea bud transcriptome

# contigs

81,774

# isoforms

194,067

Shortest isoform (bp)

201

Longest isoform (bp)

17,155

# large isoforms (>1000 bp)

108,011

N50 isoforms (bp)

2170

Ave. isoform length (bp)

1285

# paired reads used in assembly

~55 million

# nucleotides used in assembly

~23 Gb

Reads mapped in pairs (%)

58.67%

Individual reads mapped (%)

90.94%