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Table 1 Characteristics of LPAAT genes and predicted properties of LPAAT proteins in four Gossypium species

From: A genome-wide analysis of the lysophosphatidate acyltransferase (LPAAT) gene family in cotton: organization, expression, sequence variation, and association with seed oil content and fiber quality

Gene name Gene identifier Size (AA) MW (KD) pI Subcellular localization
A-class LPAAT(LPAAT2/3) (Box I: NHXXDXD; Box III: FVEGTR)
Dt-Gh9LPAAT2 Gh_D09G1169 387 43.5451 9.46 Endoplasmic reticulum
Gr6LPAAT2 Gorai.006G138600.1 387 43.501 9.53 Endoplasmic reticulum
Ga10LPAAT2 Cotton_A_07803 387 43.501 9.53 Endoplasmic reticulum
At-Gh9LPAAT2 Gh_A09G1164 387 43.492 9.63 Endoplasmic reticulum
At-Gh1LPAAT2 Gh_A01G1672 381 42.9697 9.75 Endoplasmic reticulum
Ga12LPAAT2 Cotton_A_15334 381 42.9297 9.75 Endoplasmic reticulum
Gr2LPAAT2 Gorai.002G230000.1 381 42.9136 9.68 Endoplasmic reticulum
At-Gh1LPAAT3 Gh_A01G1107 230 25.8612 9.65 Plasma membrane
Ga4LPAAT3 Cotton_A_39902 260 29.2383 8.95 Plasma membrane
Ga7LPAAT3 Cotton_A_12015 370 42.0493 9.11 Endoplasmic reticulum
Gr4LPAAT3 Gorai.004G019300.1 204 22.9039 9.4 Mitochondrial inner membrane
LPAAT4/5 LPAAT (Box I: NHXXDXD; Box III: FVEGTR)
Dt-Gh6LPAAT4 Gh_D06G0073 377 43.6875 8.86 Plasma membrane
Gr10LPAAT4 Gorai.010G012300.1 377 43.6663 8.77 Plasma membrane
At-Gh6LPAAT4 Gh_A06G0100 377 43.7905 8.77 Plasma membrane
Ga4LPAAT4 Cotton_A_06880 377 43.7715 8.67 Plasma membrane
Dt-Gb6LPAAT4 Gbscaffold17837.25.0 377 43.7625 8.77 Plasma membrane
At-Gb6LPAAT4 Gbscaffold22202.16.0 377 43.6603 8.77 Plasma membrane
Gr13LPAAT5 Gorai.013G052400.1 379 44.103 8.59 Plasma membrane
At-Gh13LPAAT5 Gh_A13G0409 354 41.1643 8.9 Mitochondrial inner membrane
Dt-Gh13LPAAT5 Gh_D13G0458 372 432.95 8.79 Plasma membrane
Ga5LPAAT5 Cotton_A_17180 384 44.6355 9.06 Plasma membrane
Dt-Gb13LPAAT5.1 Gbscaffold19187.1.0 255 29.6291 9.14 Plasma membrane
Dt-Gb13LPAAT5 Gbscaffold19187.1.3 372 43.332 8.9 Plasma membrane
B-class LPAAT (Box I: NHXSXXD; Box III: FPEGT)
At-Gh1LPAATB Gh_A01G0616 358 40.2893 9.69 Endoplasmic reticulum
Dt-Gh1LPAATB Gh_D01G0632 311 35.1431 9.78 Mitochondrial inner membrane
Ga4LPAATB Cotton_A_04784 288 32.8554 9.65 Mitochondrial inner membrane
Gr2LPAATB Gorai.002G088200.1 299 33.7234 9.79 Mitochondrial inner membrane
Dt-Gb1LPAATB Gbscaffold8424.3.0 311 35.1891 9.75 plasma membrane
At-Gb1LPAATB Gbscaffold10133.29 311 35.2282 9.77 plasma membrane
LPAAT1 (Plastidial) (Box I: NHQXXXD; Box III: FPEGT)
Ga3LPAAT1 Cotton_A_01233 312 34.2761 9.8 Microbody (peroxisome)
At-Gh5LPAAT1 Gh_A05G0428 358 39.6192 9.8 Plasma membrane
Gr9LPAAT1 Gorai.009G056600.1 355 39.3199 9.72 Plasma membrane
Dt-Gh5LPAAT1 Gh_D05G0546 355 39.392 9.69 Mitochondrial inner membrane
Gr10LPAAT1 Gorai.010G113400.1 335 37.306 9.81 Plasma membrane
Ga11LPAAT1 Cotton_A_25757 238 26.2541 9.65 Plasma membrane
Dt-Gb5LPAAT1 Gbscaffold12734.5.1 319 35.4066 9.59 Microbody (peroxisome)
Dt-Gb6LPAAT1 Gbscaffold3314.7.0 230 25.4521 9.65 Endoplasmic reticulum
At-Gb6LPAAT1 Gbscaffold6506.1.0 322 35.6169 9.8 Plasma membrane
Dt-Gb6LPAAT1.1 Gbscaffold3314.8.0 335 37.308 9.74 Endoplasmic reticulum
At-Gh6LPAAT1 Gh_A06G0884 322 35.7141 9.85 Golgi body
  1. AA amino acid, pI theoretical isoelectric point, MW theoretical molecular weight, KD Kilo Dalton