|  | Average linkage disequilibrium (r2) | |
---|---|---|---|
Breed | NSNP after QC | Adjacent SNPs (± SD) | Syntenic SNPs (± SD) |
AL | 179 | 0.169 ± 0.218 | 0.054 ± 0.077 |
BA | 173 | 0.364 ± 0.322 | 0.134 ± 0.179 |
BC | 164 | 0.392 ± 0.316 | 0.154 ± 0.193 |
CA | 178 | 0.171 ± 0.212 | 0.085 ± 0.120 |
LA | 112 | 0.641 ± 0.358 | 0.263 ± 0.289 |
NU | 154 | 0.253 ± 0.281 | 0.091 ± 0.137 |
RA | 187 | 0.130 ± 0.194 | 0.031 ± 0.051 |
SA | 179 | 0.229 ± 0.269 | 0.087 ± 0.119 |
TO | 163 | 0.265 ± 0.289 | 0.126 ± 0.159 |