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Table 9 Description and expression of up-regulated genes encoding putative effector proteins

From: Changes in the Sclerotinia sclerotiorum transcriptome during infection of Brassica napus

Gene ID

Descriptiona

Expression level (hpi)b

  

1

3

6

12

24

48

SS1G_08557

salicylate hydroxylase

4.1

5.4

5.1

3.6

5.1

10.8

SS1G_00849

22kda glycoprotein (AltA-1 allergen)

7.4

3.2

-

-

-

7.1

SS1G_10096

cerato-platanin (PF07249)

3.8

3.7

-

-

-

3.3

SS1G_07295

cfem domain-containing protein

2

-

-

-

3.9

4.8

SS1G_12336

chitin binding protein

-

3.3

-

-

-

-

SS1G_12509

LysM domain protein

-

-

-

3.8

11.8

35.4

SS1G_03611

cysteine-rich protein

-

-

-

-

85.1

247

SS1G_11912

npp1 domain protein (NEP2)

-

-

-

-

5.8

8.2

SS1G_03282

serine protease inhibitor

-

-

-

-

-

2.2

SS1G_02904

cyanoVirin-N homology (SsCVNH)

-

-

-

-

-

3.9

SS1G_00263

protein unique to S. sclerotiorum and B. cinerea (Ssv263)

-

-

-

-

-

49.2

SS1G_02068

predicted protein (SsSSVP1)

-

-

-

-

-

21.5

  1. aAnnotation based on the presence of conserved PFAM domains and BLAST reports
  2. bFold change relative to 0 h post inoculation (hpi). (-) No significant change in expression
  3. More information about the genes can be found in Additional file 3: Table S3