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Table 3 Overview of PCR data processing of all sequencing samples

From: High-throughput sequencing of pituitary and hypothalamic microRNA transcriptome associated with high rate of egg production

miRNA

Precursor/Stem-loop sequence

Gene family

Accession

Number of samples

Number of haplotypes

P-value

Number of polymorphic sites

P-value

Number of SNP

P-value

gga-miR-1684a-3p

gga-mir-1684a

mir-1684

MIMAT0007572

HP:71

LP:73

HP:16

LP:19

Total:28

0.6252

HP:34

LP:15

Total:35

0.0005***

HP:40

LP:17

Total:44

5.0214E-05***

gga-miR-1434

gga-mir-1434

mir-1434

MIMAT0007295

HP:100

LP:111

HP:25

LP:34

Total:55

0.3629

HP:45

LP:31

Total:46

0.0099**

HP:61

LP:38

Total:68

0.0001***

  1. *P < 0.05, **P <0.01, ***P < 0.001 meant significant difference between the HP and LP chickens