Gene | Chromosome | Region | Gene length | Position in gene DMR | P-value | |
---|---|---|---|---|---|---|
Start site | End site | |||||
Enriched in high fertility sires | ||||||
 MMP2 | 18 | 23848121–23848499 | 26,409 | 19,502 | 19,880 | 5.76e−9 |
 PLEX2 | 4 | 96843179–96843579 | 546,350 | 268,810 | 269,211 | 1.15e−8 |
 LOC100848700 | 12 | 71321184–71321564 | 178,963 | 42,786 | 43,167 | 1.05e−7 |
 NXPH1 | 4 | 17613149–17613545 | 374,914 | 103,807 | 104,202 | 1.08e−6 |
 EML6 | 11 | 37358428–37358736 | 287,064 | 69,783 | 70,092 | 1.34e−6 |
 PIP4K2A | 13 | 24034672–24034997 | 185,017 | 133,799 | 134,124 | 2.39e−6 |
 C5H22orf23 | 5 | 110247288–110247609 | 7926 | 6034 | 6356 | 4.86e−6 |
 CTCF | 18 | 35289322–35289651 | 45,637 | 44,126 | 44,456 | 5.76e−6 |
 LOC100848700 | 12 | 71373062–71373461 | 178,963 | 94,664 | 95,064 | 7.71e−6 |
 AGBL4 | 3 | 9778857–97788873 | 1,223,677 | 696,031 | 696,348 | 7.98e−6 |
 MAGI1 | 22 | 35613754–35614143 | 641,540 | 117,528 | 117,918 | 8.03e−6 |
 ST8SIA1 | 5 | 88297961–88298379 | 180,249 | 11,094 | 11,513 | 9.73e−6 |
 ANO6 | 5 | 35192295–35192666 | 234,931 | 135,500 | 135,872 | 9.97e−6 |
 LOC100848700 | 12 | 71363838–71364138 | 178,963 | 85,440 | 85,741 | 1.14e−5 |
 AAK1 | 11 | 67807683–67808077 | 164,724 | 7241 | 7636 | 1.30e−5 |
 LOC100848495 | 24 | 2838043–2838565 | 23,590 | 23,042 | 23,565 | 1.44e−5 |
 PIP4K2A | 13 | 24018939–24019300 | 185,017 | 118,066 | 118,428 | 1.34e−5 |
 PKHD1 | 23 | 24204511–24204877 | 458,865 | 408,928 | 409,295 | 1.68e−5 |
 FGD4 | 5 | 77824043–77824292 | 229,764 | 220,686 | 220,936 | 1.72e−5 |
Enriched in low fertility sires | ||||||
 ZFYVE28 | 6 | 108448662–108452084 | 98,584 | 64,266 | 67,689 | 2.56e−9 |
 KCNK4 | 29 | 43213341–43213911 | 10,180 | 5101 | 5672 | 6.61e−7 |
 LOC100296550 | 15 | 47960292–47960961 | 2476 |  |  | 3.03e−6 |
 USP40 | 3 | 113785622–113786388 | 89,524 | 6993 | 7760 | 8.86e−6 |
 ASPDH | 18 | 57097376–57098221 | 3087 | 529 | 1375 | 1.16e−5 |
 NANOS2 | 18 | 53852907–53853452 | 548 | 23 | 569 | 1.98e−5 |