Table 3 The expression patterns of selected genes using real-time quantitative RT-PCR and RNA-Seq
Gene | RT-PCR | RNA-Seq (FPKM) | Gene annotation | ||
|---|---|---|---|---|---|
|  | ‘G’ | ‘P’ | ‘G’ | ‘P’ |  |
Bra013652 | 0.88 ± 0.16 b | 179.31 ± 87.33 a | 79.26 | 11936.77 | Leucoanthocyanidin dioxygenase |
Bra019350 | 1.00 ± 0.05 b | 2.72 ± 0.41 a | 23.62 | 4969.47 | Leucoanthocyanidin dioxygenase |
Bra027457 | 1.35 ± 0.47 b | 23.61 ± 2.38 a | 67.91 | 15507.10 | Dihydroflavonol-4-reductase |
Bra037747 | 1.13 ± 0.11 b | 3.08 ± 0.47 a | 0 | 26.11 | Flavonol synthase/flavanone 3-hydroxylase |
Bra017520 | 1.18 ± 0.31 b | 14.76 ± 3.48 a | 0.94 | 21.80 | Basic helix-loop-helix (bHLH) family protein |
Bra017523 | 1.11 ± 0.14 b | 28.85 ± 0.80 a | 16.31 | 540.00 | Basic helix-loop-helix (bHLH) family protein |
Bra026967 | 1.12 ± 0.14 b | 8.88 ± 1.45 a | 0 | 12.00 | oxidoreductase family protein |
Bra016164 | 0.93 ± 0.11 b | 193.23 ± 8.24 a | 5.87 | 865.19 | MYB08 Myb-related protein 308 |
Bra032635 | 0.01 ± 0.00 b | 1.04 ± 0.03 a | 2.84 | 373.93 | ETC1 (ENHANCER OF TRY AND CPC 1); DNA binding / transcription factor |