Table 3 Number of NBS-encoding genes and the corresponding proportions under different sequence similarity levels between the genomes for the four cotton species
From: Genome-wide comparative analysis of NBS-encoding genes in four Gossypium species
Comparison between two cotton species (species A-species B) | Total no. of NBS genes in species A | Similarity >90% | Similarity >80% | Similarity >70% | Similarity >60% | Similarity >50% | Similarity >40% | Similarity >30% | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
No. of NBS genes in species A | Proportion of NBS genes in species A | No. of NBS genes in species A | Proportion of NBS genes in species A | No. of NBS genes in species A | Proportion of NBS genes in species A | No. of NBS genes in species A | Proportion of NBS genes in species A | No. of NBS genes in species A | Proportion of NBS genes in species A | No. of NBS genes in species A | Proportion of NBS genes in species A | No. of NBS genes in species A | Proportion of NBS genes in species A | ||
G.hirsutum - G.arboreum | 588 | 211 | 36% | 392 | 67% | 481 | 82% | 509 | 87% | 527 | 90% | 537 | 91% | 539 | 92% |
â–²G.arboreum - G.hirsutum | 246 | 140 | 57% | 202 | 82% | 211 | 86% | 214 | 87% | 219 | 89% | 221 | 90% | 225 | 91% |
G.hirsutum - G.raimondii | 588 | 275 | 47% | 452 | 77% | 491 | 84% | 522 | 89% | 529 | 90% | 537 | 91% | 539 | 92% |
â–²G.raimondii - G.hirsutum | 365 | 189 | 52% | 259 | 71% | 280 | 77% | 284 | 78% | 293 | 80% | 296 | 81% | 315 | 86% |
G.barbadense - G.arboreum | 682 | 194 | 28% | 395 | 58% | 521 | 76% | 588 | 86% | 616 | 90% | 630 | 92% | 642 | 94% |
â– G.arboreum - G.barbadense | 246 | 115 | 47% | 185 | 75% | 212 | 86% | 219 | 89% | 222 | 90% | 225 | 91% | 226 | 92% |
G.barbadense - G.raimondii | 682 | 316 | 46% | 509 | 75% | 545 | 80% | 615 | 90% | 630 | 92% | 643 | 94% | 645 | 95% |
â– G.raimondii - G.barbadense | 365 | 216 | 59% | 310 | 85% | 339 | 93% | 345 | 95% | 348 | 95% | 350 | 96% | 352 | 96% |
G.arboreum - G.raimondii | 246 | 87 | 35% | 174 | 71% | 207 | 84% | 213 | 87% | 215 | 87% | 223 | 91% | 225 | 91% |
G.raimondii - G.arboreum | 365 | 95 | 26% | 237 | 65% | 292 | 80% | 325 | 89% | 331 | 91% | 345 | 95% | 352 | 96% |