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Table 4 Results of the analysis by Tajima’s D and Fst statistics between the japonica and indica populations in the DR-I region

From: Selective sweep with significant positive selection serves as the driving force for the differentiation of japonica and indica rice cultivars

  Chr Range of the blocks Tajima’s D Fst
(Jap vs Ind)
Jap. Ind. Cultivar
1 chr01 35499730–35510003 −2.344** −2.319** 2.564** 0.93668**
2 chr01 35839043–35890683 −2.284** −2.388** 1.470 0.88126**
3 chr02 13139975–13160003 −1.971** −1.896 1.050 0.93705**
4 chr02 13349983–13360044 −1.940** −2.265** 0.953 0.93638**
5 chr02 14944936–14962544 −1.871** −1.518 1.551 0.8978**
6 chr02 27708263–27721727 −1.921** −1.917** 2.404** 0.94298**
7 chr03 1579192–1602557 −1.794 −2.420** 1.862* 0.90987**
8 chr03 2483329–2542460 −2.171** −1.616 1.587* 0.93704**
9 chr03 2706518–2724355 −2.379** −2.458** 1.533* 0.84626**
10 chr03 2832279–2854311 −2.412** −2.235* 1.182 0.58542
11 chr03 2896026–2923841 −2.343** −2.108** 1.708* 0.90956**
12 chr03 2997394–3195565 −2.220** −1.027 2.526** 0.94684**
13 chr03 3479756–3498823 −2.313** −0.066 2.738** 0.9228**
14 chr03 24189350–24230136 −2.058** −2.162** 1.219 0.92474**
15 chr03 28469725–28489493 −2.303** −1.961** 1.236 0.8877**
16 chr04 34409908–34420007 −2.097** −1.729 2.262* 0.91761**
17 chr04 34469603–34500654 −1.915** −2.145** 1.701* 0.93408**
18 chr05 21659599–21670204 −1.757 −2.137** 0.900 0.89436**
19 chr05 22789981–22800012 −1.857 −2.009** 2.331** 0.91203**
20 chr05 22869880–22880236 −1.993** −2.020** 2.582** 0.85427**
21 chr05 24026607–24070766 −2.116** −1.458 2.510** 0.74986**
22 chr05 24300403–24330214 −2.017** −2.275** 2.936** 0.94534**
23 chr05 26824033–26840483 −1.731 −1.795 2.738** 0.93111**
24 chr07 4149981–4163826 −1.766 −1.686 2.518** 0.92099**
25 chr07 25598750–25620217 −2.310** −2.049** 2.955** 0.89888**
26 chr09 22759164–22771433 −2.131** −2.444** 0.349 0.93668**
27 chr09 22910542–22930021 −1.892 −2.106** 2.634** 0.88126**
28 chr10 21289972–21400480 −2.120** −1.634 2.594** 0.93705**
  1. *and **indicate P-value < 0.05 and 0.01, respectively