Table 3 Comparison in real data set
From: GaussianCpG: a Gaussian model for detection of CpG island in human genome sequences
aMethod: | I | II | III | IV | V |
|---|---|---|---|---|---|
T | 348930 | 348930 | 348930 | 348930 | 348930 |
TP | 255732 | 348546 | 333015 | 300315 | 292732 |
FN | 93198 | 384 | 15915 | 48615 | 56198 |
F | 46361053 | 46361053 | 46361053 | 46361053 | 46361053 |
FP | 397423 | 1680731 | 1034353 | 583460 | 363493 |
TN | 46124740 | 44417698 | 45331765 | 45923959 | 46075369 |
bMethod: | I | II | III | IV | V |
Sn | 73.29% | 99.88% | 95.43% | 86.06% | 83.89% |
Sp | 99.14% | 96.35% | 97.76% | 98.74% | 99.21% |
Acc | 98.95% | 96.38% | 97.75% | 98.65% | 99.10% |
Mcc | 53.11% | 40.65% | 47.61% | 53.60% | 60.80% |
Ppv | 39.15% | 17.17% | 24.35% | 33.98% | 44.60% |
Pc | 34.26% | 17.17% | 24.07% | 32.20% | 41.08% |
F1 | 51.03% | 29.31% | 38.80% | 48.72% | 58.24% |