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Table 1 Filtering results on the unrelated dataset

From: Efficient detection of viral transmissions with Next-Generation Sequencing data

Filter

Individually

Serial workflow

k-mer bloom filter

52536 (65.5%)

52536 (65.5%)

Hamming radius filter

67940 (84.7%)

68242 (85.1%)

Identical sequences filter

0 (0.0%)

68242 (85.1%)

  1. Number of candidate pairs removed by each filtering approach