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Fig. 2 | BMC Genomics

Fig. 2

From: A scalable and memory-efficient algorithm for de novo transcriptome assembly of non-model organisms

Fig. 2

Sensitivity and specificity comparisons of SOAPdenovo-Trans, Trans-ABySS and ASplice with respect to mRNA BLAST results in model organisms over different values of k and k-mer coverage cutoff c (represented by k_c). Sensitivity (sens; marked by bars) is defined to be the percentage of nucleotide positions in the transcriptome that are recovered through the top BLAST alignments from each node in the assembly. Specificity (spec; marked by lines) is defined to be the percentage of predicted positions that are included in the top BLAST alignments from each node of the assembly

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