From: A scalable and memory-efficient algorithm for de novo transcriptome assembly of non-model organisms
C. ruf | splicing | max | Â | >1-node | max | avg | D. mel | unique | >1-hit | max | mem |
---|---|---|---|---|---|---|---|---|---|---|---|
k_c | graphs | length | N50 | graphs | nodes | nodes | hits | hits | graphs | hits | (GB) |
31_50 | 67945 | 29763 | 1482 | 20900 | 2066 | 33 | 17516 | 9246 | 1029 | 15 | 13 |
31_100 | 52099 | 27855 | 1651 | 16790 | 2786 | 27 | 16237 | 9090 | 844 | 38 | 10 |
31_200 | 41872 | 35802 | 1717 | 13318 | 2648 | 21 | 15013 | 8776 | 624 | 68 | 9 |
35_50 | 66381 | 55047 | 1600 | 20465 | 5299 | 33 | 16470 | 9235 | 994 | 59 | 13 |
35_100 | 53120 | 34347 | 1686 | 16529 | 1398 | 26 | 15965 | 9062 | 769 | 14 | 10 |
35_200 | 41421 | 35802 | 1769 | 13159 | 4076 | 21 | 14693 | 8723 | 582 | 76 | 9 |