Table 2 Average type 1 error rates of the statistic for testing interaction between two genes with marginal effect at the first genes over 10 pairs of genes
From: Functional regression method for whole genome eQTL epistasis analysis with sequencing data
Rare Variants | Common & Rare Variants | ||||
|---|---|---|---|---|---|
0.05 | 0.01 | 0.001 | 0.05 | 0.01 | 0.001 |
0.0507 | 0.0094 | 0.0007 | 0.0491 | 0.0100 | 0.0010 |
0.0500 | 0.0098 | 0.0009 | 0.0489 | 0.0099 | 0.0012 |
0.0508 | 0.0108 | 0.0010 | 0.0496 | 0.0096 | 0.0011 |
0.0490 | 0.0101 | 0.0010 | 0.0498 | 0.0103 | 0.0011 |
0.0490 | 0.0101 | 0.0010 | 0.0506 | 0.0093 | 0.0008 |