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Fig. 6 | BMC Genomics

Fig. 6

From: Differentially expressed genes from RNA-Seq and functional enrichment results are affected by the choice of single-end versus paired-end reads and stranded versus non-stranded protocols

Fig. 6

Comparing FDR values of the DEGs found using the PE data with the SE and NS data. The FDR values of the DEGs found in the PE data set are plotted on the x-axis and the corresponding FDR value for those genes in the SE data or NS data are plotted on the y-axis. The blue horizontal line shows the 0.05 cut-off. All genes above the line would not be classed as DEGs although the FDR is lower than 0.1. a Experiment 2 PE vs SE comparison (b) Experiment 2 PE vs NS comparison

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BMC Genomics

ISSN: 1471-2164

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