In-depth genome characterization of a Brazilian common bean core collection using DArTseq high-density SNP genotyping

Table 2 Genetic diversity and divergence within Andean and Mesoamerican gene pools

Group	S	P	NAP	H_O (SE)	H_E (SE)	F (SE)	F_ST (SE)	F_IS (SE)	F_IT (SE)	PI	PE
Andean	64	82.99%	511	0.040 ± 0.002	0.102 ± 0.002	0.561 ± 0.006	0.747 ± 0.001	0.822 ± 0.001	0.955 ± 0.0031	1.05E-249	1
Mesoamerican	111	90.76%	941	0.035 ± 0.001	0.168 ± 0.002	0.652 ± 0.006	0.747 ± 0.001	0.822 ± 0.001	0.955 ± 0.0031	0	1
Total	175	100	-	0.0373 ± 0.001	0.4425 ± 0.001	0.9082 ± 0.003				0	1

The sample size (S), percentage of polymorphic loci (P), number of private alleles (NAP), observed heterozygosity (H _O), gene diversity (H _E), inbreeding coefficient (F), genetic differentiation (F _ST), fixation index (F _IS), total inbreeding (F _IT), probability of identity (PI), probability of exclusion (PE), and standard deviations (SE) are presented

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