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Table 2 Detailed summary of the results (typeability and concordance) of the three WGS methods

From: Comparison of molecular serotyping approaches of Streptococcus agalactiae from genomic sequences

  cpsG-K Full CPS SNP-based Grant total
TRUE FALSE NT TRUE FALSE NT TRUE FALSE NT n/aa
Latex agglutination Ia 155 16    4 167 151 15 5   179
Ib 44 16   43 9 8 43 14 3   61
II 47    47    41   6   48
III 336 18    6 348 320 16 18   378
IV 20 1   20   1 20 1    22
IX 9 4   1 2 10 9 3 1   13
V 57 10    7 60 55 9 3   70
VI 7 3 1 7   4 7 3 1   11
VII 7      7 7     7
VIII 2 8   2 2 6   8   2 10
NT   29    12 17   27 2   30
  Grant total 684 105 1 120 42 628 653 96 39 2 829
  1. TRUE corresponds to concordant with latex agglutination results, FALSE corresponds to discordant, NT is non-typeable whereas n/a is not applicable for the method (relevant only for the SNP approach)
  2. aSerotype VIII with both latex agglutination and Full CPS