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Table 3 Thirteen genes annotated in the Rag5 candidate region of chromosome 13 based on Glyma.Wm82.a2.v1 and comparison of their transcript abundance between R- and S-NIL

From: Transcriptomic dynamics in soybean near-isogenic lines differing in alleles for an aphid resistance gene, following infestation by soybean aphid biotype 2

Gene ID Annotation Log2fold change (R/S)a  
   0 hai 6 hai 12 hai 48hai
Glyma.13g189800 Member of ‘GDXG’ family of lipolytic enzyme 0.4 1.5** 0.7 0.7
Glyma.13g189900 Choline/Ethanoalamine kinase 0.1 0 0 0
Glyma.13g190000 Leucine-rich repeat-containing protein 0.6 -0.5 -0.2 -0.3
Glyma.13g190100 ORF protein -0.2 0 0 0.4
Glyma.13g190200 Protease family S26 Mitochondrial inner membrane protease -2.3**** -2.0**** -2.0**** -1.8***
Glyma.13g190300 Leucine-rich repeat-containing protein 0.9 0.3 0.6 0
Glyma.13g190400 Leucine-rich repeat-containing protein 1.2 0.5 0.7 0.1
Glyma.13g190500 Protease family S26 Mitochondrial inner membrane protease 1.3 1.7* 2.1**** 0.8
Glyma.13g190600 Present only in the Glyma.Wm82.a2 assembly 2.2**** 2.1**** 2.0**** 0.6
Glyma.13g190700 Present only in the Glyma.Wm82.a2 assembly 0.1 0.1 0 0
Glyma.13g190800 Leucine-rich repeat-containing protein 1.1 0.7 0.9 0.2
Glyma.13g190900 Protease family S26 Mitochondrial inner membrane protease 0.2 0.3 0.5 0.1
Glyma.13g191000 Protein of unknown function 0 0.1 0.1 0.4
  1. aAsterisks indicate significance levels: *, FDR < 0.05; **, FDR < 0.01; ***, FDR < 0.005; ****, FDR < 0.001