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Table 1 Jasmonic acid genes more highly expressed in wild type seedlings

From: Transcriptome analysis uncovers Arabidopsis F-BOX STRESS INDUCED 1 as a regulator of jasmonic acid and abscisic acid stress gene expression

AGI Number Common Name Expression After MeJA Treatment Expression WT to fbs1–1 Annotation
0.5 h 1 h 3 h
At1g52000   3.0 12.1 34.3 5.6 Mannose-binding lectin superfamily protein
At1g52400 BGLU18 1.0 2.3 7.5 11.2 Beta glucosidase 18
At1g52030 MBP2 0.9 2.8 39.4 12.5 Myrosinase binding protein 2
At1g52410 TSA1 1.0 3.2 34.3 5.9 Calcium binding repeat sequence, possible role in mitosis
At3g28220   1.4 7.0 59.7 3.9 TRAF-like family protein
At4g17470   5.3 11.3 111.4 1.9 Alpha/beta-hydrolases superfamily protein
At5g24420 PGL5 3.0 8.0 48.5 2.9 Cytosolic 6-phosphogluconolactonase
At3g28270 AFL1 1.0 2.0 32.0 5.6 Peripheral membrane protein, growth regulation in drought
At3g44970   1.0 0.9 1.9 1.9 Cytochrome P450 superfamily protein
At1g18710 MYB47 12.1 13.9 21.1 10.6 R2R3-MYB transcription factor
At3g04000   1.1 2.5 4.3 1.9 NAD(P)-binding Rossmann-fold superfamily protein
At1g53870   1.9 2.8 3.7 1.9 Protein of unknown function
At1g44790   1.5 2.0 3.2 2.1 ChaC-like family protein
At1g19670 CORI1 10.6 24.3 34.3 1.9 Chlorophyllase, chlorophyll degradation
At4g21903   1.3 2.5 4.6 1.9 MATE efflux family protein, transporter
At3g25760 AOC1 2.0 2.8 4.0 2.6 Allene oxide cyclase I, jasmonic acid biosynthesis
At3g51450   4.3 7.5 11.3 2.4 Calcium-dependent phosphotriesterase superfamily protein
At4g23600 CORI3 1.4 2.0 4.3 37.5 Cystine lyase, metabolism of ethylene precursors
At1g66760   4.0 10.6 7.0 1.7 MATE efflux family protein, transporter
At4g30270 XTH24 1.4 2.6 1.9 2.2 xyloglucan endotransglucosylase
At1g12240 FRUCT4 2.8 4.0 3.5 2.4 Vacuolar invertase
At1g44350 ILL6 8.0 13.9 9.8 1.8 Similar to IAA amino acid conjugate hydrolase
At1g72450 JAZ6 8.0 9.2 6.5 2.7 Central negative regulator of jasmonic acid genes
At1g70700 JAZ9 13.9 29.9 26.0 1.9 Central negative regulator of jasmonic acid genes
At5g05600   7.5 19.7 17.1 3.2 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
At3g50270   1.5 1.7 2.1 2.9 HXXXD-type acyl-transferase family protein
At5g47220 ERF2 9.2 6.1 1.7 2.3 Transcription factor, positive regulator of JA defense
At1g66100   1.9 8.6 15.0 116.8 Pathogenesis related protein, plant thionin
At1g71030 MYBL2 0.5 0.4 0.6 1.9 Transcription factor, negatively controls anthocyanin synthesis
At2g02990 RNS1 0.7 1.6 0.9 1.9 Ribonuclease, responds to inorganic phosphate starvation
At2g16720 MYB7 0.9 1.4 1.2 1.8 Transcription factor, induced by salt, inhibits flavonol production
  1. Shown are normalized expression levels from the AtGenExpress data set for seven day-old seedlings treated for 0.5, 1, or 3 h with MeJA treatment and normalized expression levels from a comparison between WT and fbs1–1 in 12 day-old seedlings after seven days of 10 °C treatment. Arabidopsis Genome Initiative (AGI) numbers, common gene names, and abbreviated annotations are based on the TAIR10 genome