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Table 1 Jasmonic acid genes more highly expressed in wild type seedlings

From: Transcriptome analysis uncovers Arabidopsis F-BOX STRESS INDUCED 1 as a regulator of jasmonic acid and abscisic acid stress gene expression

AGI Number

Common Name

Expression After MeJA Treatment

Expression WT to fbs1–1

Annotation

0.5 h

1 h

3 h

At1g52000

 

3.0

12.1

34.3

5.6

Mannose-binding lectin superfamily protein

At1g52400

BGLU18

1.0

2.3

7.5

11.2

Beta glucosidase 18

At1g52030

MBP2

0.9

2.8

39.4

12.5

Myrosinase binding protein 2

At1g52410

TSA1

1.0

3.2

34.3

5.9

Calcium binding repeat sequence, possible role in mitosis

At3g28220

 

1.4

7.0

59.7

3.9

TRAF-like family protein

At4g17470

 

5.3

11.3

111.4

1.9

Alpha/beta-hydrolases superfamily protein

At5g24420

PGL5

3.0

8.0

48.5

2.9

Cytosolic 6-phosphogluconolactonase

At3g28270

AFL1

1.0

2.0

32.0

5.6

Peripheral membrane protein, growth regulation in drought

At3g44970

 

1.0

0.9

1.9

1.9

Cytochrome P450 superfamily protein

At1g18710

MYB47

12.1

13.9

21.1

10.6

R2R3-MYB transcription factor

At3g04000

 

1.1

2.5

4.3

1.9

NAD(P)-binding Rossmann-fold superfamily protein

At1g53870

 

1.9

2.8

3.7

1.9

Protein of unknown function

At1g44790

 

1.5

2.0

3.2

2.1

ChaC-like family protein

At1g19670

CORI1

10.6

24.3

34.3

1.9

Chlorophyllase, chlorophyll degradation

At4g21903

 

1.3

2.5

4.6

1.9

MATE efflux family protein, transporter

At3g25760

AOC1

2.0

2.8

4.0

2.6

Allene oxide cyclase I, jasmonic acid biosynthesis

At3g51450

 

4.3

7.5

11.3

2.4

Calcium-dependent phosphotriesterase superfamily protein

At4g23600

CORI3

1.4

2.0

4.3

37.5

Cystine lyase, metabolism of ethylene precursors

At1g66760

 

4.0

10.6

7.0

1.7

MATE efflux family protein, transporter

At4g30270

XTH24

1.4

2.6

1.9

2.2

xyloglucan endotransglucosylase

At1g12240

FRUCT4

2.8

4.0

3.5

2.4

Vacuolar invertase

At1g44350

ILL6

8.0

13.9

9.8

1.8

Similar to IAA amino acid conjugate hydrolase

At1g72450

JAZ6

8.0

9.2

6.5

2.7

Central negative regulator of jasmonic acid genes

At1g70700

JAZ9

13.9

29.9

26.0

1.9

Central negative regulator of jasmonic acid genes

At5g05600

 

7.5

19.7

17.1

3.2

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase

At3g50270

 

1.5

1.7

2.1

2.9

HXXXD-type acyl-transferase family protein

At5g47220

ERF2

9.2

6.1

1.7

2.3

Transcription factor, positive regulator of JA defense

At1g66100

 

1.9

8.6

15.0

116.8

Pathogenesis related protein, plant thionin

At1g71030

MYBL2

0.5

0.4

0.6

1.9

Transcription factor, negatively controls anthocyanin synthesis

At2g02990

RNS1

0.7

1.6

0.9

1.9

Ribonuclease, responds to inorganic phosphate starvation

At2g16720

MYB7

0.9

1.4

1.2

1.8

Transcription factor, induced by salt, inhibits flavonol production

  1. Shown are normalized expression levels from the AtGenExpress data set for seven day-old seedlings treated for 0.5, 1, or 3 h with MeJA treatment and normalized expression levels from a comparison between WT and fbs1–1 in 12 day-old seedlings after seven days of 10 °C treatment. Arabidopsis Genome Initiative (AGI) numbers, common gene names, and abbreviated annotations are based on the TAIR10 genome