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Table 1 Summary of HI-Seq Illumina Transcriptome assembly of Bacopa monnieri root and shoot tissue after two independent biological replicate

From: Comparative transcriptome analysis of shoot and root tissue of Bacopa monnieri identifies potential genes related to triterpenoid saponin biosynthesis

 

Unigenes_Shoot**

Unigenes_Root**

Number of transcripts identified

1,42,295

1,78,308

Maximum Contig Length

16,771

16,744

Minimum Contig Length

300

300

Average Contig Length

999.7 ± 826.2

931.5 ± 793.6

Median Contig Length

751

1116

Total Contigs Length

14,22,49,012

16,60,98,010

Total Number of Non-ATGC Characters

0

0

Percentage of Non-ATGC Characters

0

0

Contigs > = 100 bp

1,42,295

1,78,308

Contigs > = 200 bp

1,42,295

1,78,308

Contigs > = 500 bp

93,697

1,11,010

Contigs > = 1 Kbp

49,751

54,765

Contigs > = 10 Kbp

16

16

N50 value

1407

1281

  1. Double astrick symbol indicates the representative transcrips of shoot and root